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“We need to be prepared”: test developed for Japanese encephalitis virus

When porcine epidemic diarrhea virus (PEDV) struck U.S. pig herds in 2013, the Iowa State University (ISU) Veterinary Diagnostic Laboratory (VDL) – which carries the nation’s largest swine caseload – scrambled to design a high-capacity test to keep up with the outbreak. Then they had to play a little catch-up to manage the large caseload, which taught the researchers many lessons.

It’s part of the reason VDL researchers have developed a diagnostic test for swine to detect Japanese encephalitis virus (JEV), a mosquito-borne disease common in southeast Asia that hasn’t been seen in the US.

JEV became a higher priority after it spread to Australia in 2022, prompting the Swine Health Information Center – a pork checkoff-funded industry organization charged with monitoring swine diseases – to fund development of a real-time polymerase chain reaction (PCR) test for JEV, the same genetically based screening method considered the gold standard for diagnosing COVID-19.

Having a federally approved JEV test ready would help mitigate the damage of a possible outbreak, which could cause a drop in U.S. pork production of 1-2% and lead to economic losses of up to $612 million, according to an estimate commissioned by the Swine Health Information Center.

While most cases of JEV in pigs lead to minor symptoms, it can cause neurological and reproductive issues. JEV also poses risks for other animals, including humans. Severe symptoms in infected humans are rare, but in the 1 in 250 cases where they develop, the fatality rate is as high as 30%, according to the World Health Organization. The test developed at Iowa State, which can detect all five genotypes of JEV, could be used for humans, said Rahul Nelli, head of the research project.

Type and source of fibre can affect emission from pigs

Because individual pigs produce less methane than cattle, emissions from swine haven’t received as much attention in the scientific literature, according to Elvira Sattorova, a postdoctoral researcher at Aarhus University. But the cumulative impact of pig production is a matter of concern for countries with larger pig populations, including Denmark, Sattorova said. And scientists still know very little about the levers and controls that could minimize methane emissions from swine.

The first study by Sattorova’s research team, which is slated for publication in the October edition of Animal Feed Science and Technology, points to the potential impact of diet. In the study, growing pigs and sows fed diets with large quantities of beet pulp produced more enteric methane than those fed conventional diets or diets with higher quantities of wheat bran. Beet pulp contains more soluble fiber, while wheat bran contains more insoluble fiber, Sattorova explained. Soluble fiber is thought to be easier for most animals to ferment, which in swine appears to result in greater emissions of methane.

The initial study focused on enteric emissions — emissions from the digestive tract — and didn’t consider possible tradeoffs with the potential for emissions from manure. Though future work by Sattorova’s team will consider manure and other factors contributing to emissions from pig production, she said they wanted to focus on fiber in the first study on account of the growing interest in using byproducts that contain different types and quantities of fiber in pig diets.

The use of byproducts is generally considered a means of making animal agriculture more sustainable. But without better data on enteric emissions from pigs, it’s difficult to say with certainty whether the change in diet results in a net benefit to the planet, Sattorova said.

India considers ban on important antibiotics used in animal production

Production, import and distribution of two types of antibiotics may be subject to a future ban for use in India’s farm animals, reports Economic Times. The two drugs — chloramphenicol and nitrofurans — are important treatments for urinary tract infections caused by bacteria in humans.

According to the source, the government is blaming antimicrobial resistance (AMR) and a resulting decline in antibiotic efficacy in human medicine on the overuse of these antibiotics in feeds for poultry and livestock.

At the recent EuroAsia 2024 in Bengaluru, India, several medical experts in critical care warned of the “significant and growing threat” of AMR in the country. It is estimated that AMR already accounts for the deaths of 1.2 million Indians annually. According to BW Healthcare World, this could rise to 10 million per year by 2050. Also to be expected are adverse health care outcomes and longer hospital stays.

Within human medicine, several speakers highlighted the need for enhanced antibiotic stewardship, improved surveillance systems and more effective prevention measures to help stop the spread of antibiotic-resistant “superbugs.” An issue of concern expressed by some of the experts is the excessive and inappropriate use of antibiotics in India, according to the article.

Irish university project to reduce greenhouse gases launches with major funding

The University of Galway has received EUR 1.4 million to lead a research consortium to pioneer greenhouse gas reduction solutions for agriculture.

Teagasc, the Northern Ireland-based Agri-Food and Biosciences Institute (AFBI) and the Irish Cattle Breeding Federation will work with scientists at the university to expand testing and evaluation of a combination of cutting-edge technologies and farming innovations to lower methane emissions from cattle and sheep.

The research-based project, Methane Abatement in Grazing Systems (MAGS) focuses on evaluating solutions for feed, breeding and manure management.

It aims to apply the most effective feed additives, while improving their formulation for long-lasting effects, in combination with novel genomic breeding and manure management. Scientific analysis will identify the best combinations of strategies which can be delivered on farms in Northern Ireland and in the Republic, through the Teagasc Signpost program.

Agriculture contributes about 37% of Irish greenhouse gas emissions. Government has committed to reducing these farming related emissions by 25% by 2030, including a recommended 10% reduction in agri-methane.

Methane accounts for about 70% of emissions associated with agriculture, predominantly from methane produced in the gut of the animal as feed ferments in the rumen, while methane from manure and slurry are the third largest contributor to emissions from farms.

China picks 3 large EU pork processors for dumping investigation

China will examine 3 large European pork processors in the context of the recently announced investigation into alleged “dumping practices of pig products” on the Chinese market. Danish Crown (Denmark), Vion Food Group (the Netherlands) and Litera Meat (Spain) were all ‘selected’ for a detailed investigation, Beijing’s trade department said.

In June, China announced that the country would be investigating what it feels to be unfair trade practices by EU pork exporters, following complaints from the China Animal Husbandry Association (CAHA). It is generally assumed that China has taken the step in retaliation to an EU decision to put a levy on imported Chinese electric cars, despite denials by the Chinese authorities.

All 3 companies have announced that they will fully cooperate and hand over all information requested by the Chinese authorities. They or their national organisations strongly deny the allegations.

Spain is by far the largest exporter of pork and pork products to China. According to figures by Interporc, Spain’s national organisation for the pig sector, in 2023 the Spanish pork industry producers exported 560,448 tonnes with a total value of €1.2 billion. About 20% of all Spanish pork exports went to China. When seen from a Chinese perspective, about 21% of all Chinese pork imports come from Spain. There is no indication from the National Association of Meat Industries of Spain (ANICE) that they are concerned about the Chinese action.

“We enter this phase with full peace of mind, just like the European Commission does. At the same time, we have to open, and keep open, the necessary communication lines between the authorities in China and Spain as well as the EU. If necessary, we will take the initiative to organise that”, said Giuseppe Aloisio, general director of ANICE.

News agency Reuters said that the probe is expected to be completed in June 2025, but could be extended by another 6 months.

Grape pomace can reduce dairy cattle methane emissions

Researchers at University of California, Davis, added fresh grape pomace left over from winemaking operations to alfalfa-based feed for dairy cows and found that methane emissions were reduced by 10% to 11%. The preliminary findings could offer a low-cost sustainable pathway for vineyards to reduce waste while helping dairy operations maintain quality while cutting back on emissions of methane, which is a powerful greenhouse gas.

“We found that the feed with the additive of grape pomace changed the fatty acid composition of the milk and, in particular, increased the polyunsaturated fats, which are the main fats in grape pomace,” said Selina Wang, head of research. “This suggests that supplementing the feed with an optimal fatty acid profile may have positive impact on the fatty acid profile of the milk and increase their health benefits.”

Wine grapes are high in fats and tannin, which is known to reduce methane emissions, so the research sought to test if adding grape pomace to feed could have a positive effect while not adversely affecting production. “It’s a byproduct that’s not being used much,” he said. “This is something that can be included in our efforts to try to reduce emissions.”

To do the research, scientists worked with Holstein dairy cows and gave the animals feed consisting of alfalfa, wheat, almond hulls, cottonseed and grain. After two weeks, the cows were split into three groups: A control group with no change in diet, another where the feed combination included 10% grape pomace and a third that received 15% grape pomace. Every four weeks, the cow groups would change feed combinations.

They were fed twice daily by postdoctoral students and interns, and emissions were monitored daily. Milk production was documented in the morning and evening and milk samples were collected weekly to analyze for fat, protein, lactose and other measurements, which showed no differences between the control and other groups.

Methane and hydrogen emissions were reduced compared with the control group, suggesting that grape pomace reduced enteric emissions without affecting production.

World’s first carbon tax on Danish farmers

After 5 months of intense negotiations the Danish government is introducing an agricultural carbon tax payable by farmers, the first of its kind worldwide.

From 2030, this climate tax on agriculture will be charged at 300 Danish krone (€40; US$43) per ton of CO2e produced, increasing to 750 Danish krone (€100; US$107) by 2035.

However, a basic deduction, or tax break, of 60% will be applied to the average emissions from different types of livestock, providing an economic advantage to climate-efficient farmers. Following this reduction, farmers will pay 120 Danish krone (€16; US$17) per ton of CO2e in 2030, and 300 Danish krone in 2035.

Denmark is a big exporter of dairy and pork produce and agriculture emissions make up 22.4% of the country’s total carbon emissions, compared with 15.6% ten years ago.

In terms of numbers, Denmark has 547,000 dairy cows, on 2,300 farms, producing 5.87 billion kg of milk per year. It has around 900,000 beef and other cattle as well as 11.5 million pigs.

Experts believe the carbon tax will slash 1.8 million tonnes of carbon production in its first year of operation, enabling Denmark to meet its target of cutting 70% of its total emissions by that year.

This bold move comes with the agreement between the coalition government and a number of Danish farming bodies and is likely to set a precedent for other countries to follow. Sanctioning the tax with the Danish government were the Danish Agriculture and Food Council, the Danish Society for Nature Conservation, the Confederation of Danish Industry, the Trade Union NNF, and the Danish Local Government Association.

The money raised by this carbon tax is said to be going back into the agricultural sector to enhance green initiatives and climate technology. Calls have been made to ensure this tax collection is regulated and that it should possible align with an emissions trading system at EU level.

Meanwhile, farmers around the world took to social media to comment on the tax. Some called it “a real breakthrough moment for agriculture” whilst others said: “Take note, this nonsense is coming our way too.”

Affects of dietary crude protein and lysine levels in slow-growing birds

Nutritional factors are critical to bird performance and meat quality. Chinese researchers have found that high lysine levels in a low crude protein diet can improve meat tenderness by regulating the myofiber characteristic without affecting production performance in poultry.

Scientists from the Institute of Animal Husbandry and Veterinary Medicine, Beijing Academy of Agriculture and Forestry Sciences, China, investigated the effects of dietary crude protein (CP) and lysine levels on growth performance, slaughter performance, meat quality, and myofiber characteristics of slow-growing chicken.

A 3 x 3 factorial experiment was arranged, and the chickens were fed with 3 levels of dietary CP (16%, 17%, 18%) and 3 levels of dietary lysine (0.69%, 0.84%, 0.99%). A total of 540 8-week-old Beijing-You Chicken (BYC) female growing chickens were randomly allocated to 9 groups, 5 replicates per group, and 12 chickens per replicate.

Growth performance, slaughter performance, meat quality, and myofiber characteristics were determined at 16 weeks of age. The results showed that dietary CP level and the interaction of dietary CP and lysine levels affected average feed intake (AFI). The AFI in the 16% CP and 17% CP groups was higher than in the 18% CP group.

Dietary CP levels significantly affected body weight gain (BWG) at 9-16 weeks. The 18% CP group had the highest BWG (93.99 g). Dietary CP levels affected the percentage of leg muscle yield, and the percentage of leg muscle yield of the 16% CP group was significantly lower than that in the other groups. Dietary CP and lysine levels alone and their interactions did not affect pH24h, drip loss, and cooking loss of breast muscle. The shear force of the 18% CP group (29.55 N) was higher than that in the other groups.

By examining myofiber diameter and the thickness of endomysium and perimysium, the researchers found that reducing dietary CP level and adding appropriate lysine can reduce myofiber diameter and increase perimysium thickness, reducing shear force and improving meat tenderness.

Many would like to use egg vending machines

The Eggspress vending machine popular in Ireland recently went viral with over eight million views on social media platform TikTok when one user videoed and posted his experience.

The machine reads the name of a family-owned egg farm in Ireland “Egan’s Farm Free Range” and features a card reader with 28 slots that can be opened. After the consumer paid $7, one of the 28 slots popped open and revealed a flat of 30 unrefrigerated brown shell eggs. The user, excited about the price, exclaimed “This would have been $1,000 in America!”

Multiple commentors on the video reference the price of the eggs and a few small farmers agreed that a vending machine would be a great way to sell their shell eggs that they do not have an outlet for currently.

Eggspress Vending owner Paddy Muckian told media outlet Agriland that he was first inspired to design a vending machine on his poultry farm to provide 24-hour sales access after he noted a gap in the market.

“I knew we were missing sales, there were people calling into the yards and we weren’t always at home, so that’s why I started it,” he stated.

According to Muckian, the vending machine allows small egg producers to save in overhead costs and offer lower prices to consumers. Additionally, selling directly to the consumer allows for producers to market locally.

Due to the popularity, the vending machine is now sold across Ireland, the UK and Europe. Additionally, Muckian is in the process of developing a refrigerated model for the U.S. market due to the increased interest from the TikTok video. Muckian added, “We have an order coming from America now and in the states, eggs have to be chilled throughout the whole sales process. The buyer has already paid for one machine and he’s looking at purchasing more.”

Study confirms mammal-to-mammal H5N1 spread

A new Cornell University study provides evidence that a spillover of avian influenza from birds to dairy cattle across several US states has now led to mammal-to-mammal transmission.

“This is one of the first times that we are seeing evidence of efficient and sustained mammalian-to-mammalian transmission of highly pathogenic avian influenza H5N1,” said Diego Diel, associate professor of virology and director of the Virology Laboratory at the Animal Health Diagnostic Center (AHDC) in the College of Veterinary Medicine.

Whole genome sequencing of the virus did not reveal any mutations in the virus that would lead to enhanced transmissibility of H5N1 in humans, although the data clearly shows mammal-to-mammal transmission, which is concerning as the virus may adapt in mammals, Diel said.

As of July 24, 11 human cases have been reported in the U.S., with the first dating back to April 2022, each with mild symptoms: four were linked to cattle farms and seven have been linked to poultry farms, including an outbreak reported in the past few weeks in Colorado. These recent patients fell ill with the same strain identified in the study as circulating in dairy cows, leading the researchers to suspect that the virus likely originated from dairy farms in the same county.

While the virus has the ability to infect and replicate in people, the efficiency of those infections is low.

“The concern is that potential mutations could arise that could lead adaptation to mammals, spillover into humans and potential efficient transmission in humans in the future,” Diel said.

It is therefore critical to continue to monitor the virus in affected animals and also in any potential infected humans, Diel said. The U.S. Department of Agriculture (USDA) has funded programs for H5N1 testing, at no cost to producers. Early testing, enhanced biosecurity and quarantines in the event of positive results would be necessary to contain any further spread of the virus, according to Diel.